Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915055.1_cds_XP_016464978.1_57968
CDS Infomation

[gene=LOC107787878] [db_xref=GeneID:107787878] [protein=probable pectinesterase/pectinesterase inhibitor 25] [protein_id=XP_016464978.1] [location=join(139389..140060,143735..144074,144191..144879)] [gbkey=CDS]
Sequence

ATGTCAAAGCAGCTGCTACTCTTCTTCTTCATCCTTTTTTCTTTAACTCTTCCAATTTTC
AGCCAAATTACTCCTCCTTCACAATCACCTTCTGTCGCATGCAAATCCTCACTTTACCCA
AAACTCTGCCGATCCCTTCTCTCTGCATTTCAGCATTCTCCTTCTAACCCAAATGACTAC
AGCAAGTTCTCTGTGAAGCAATGCCAGAAAAATGCGGGCAAATTATCCAGCTTAATCGCA
CATTTTCTTACAACCCAGAAAGGGAGAGCACTATTTGTGAACAGCAAAGAGATTACTGCT
TTAAATGACTGTCACCAGCTCTCTGAGCTCACAGTCGATTACTTAGAGTCCATCTCTGCC
GAGCTGAAAGCAGCTGACGGTGCCACTACTTCCGATGCTTTAGTTGGAAAAATGCAGACA
TTGCTGAGTGCTGTGGTGACGAATCAGCAAACGTGTTATGAGGGACTGAAAGAAGCAGGC
AGTAGCATGGTGGCTGAATTGTTGGCGCCGCTGAGCAACGCGGCGGAAATCTACAGCGTG
TCTCTTGGGTTGGTGGCGCATGCATTGGGACGGGTAAGGAAACCCAGAAAAACTGGCGGA
TTGTTGGCTGAGCACAGAGGATTGATGGAGGAAGAGTACTGGGCACGAGATTCAAGATTG
ATGGCTTCCAAGGTTAAACAAGCATCGGAGAGGTCTCATCAAAGGGGTGGAAGGATTCTT
GACGAGTTGGTAGAAAATGGGGTTCACATTAATCAAACCGTAACAGTTAGCCCTTATGGT
GGCTGCAACTTTACATCAATAGGAGAAGCCATTGCATTTGCGCCTAATAACTCAATGATT
GAAGATGGCTATTTTCTCATCTACGCGAAGCAAGGATACTACGAGGAGTATGTTGTCGTG
CCCAAGAACAAGAAAAATATTATGTTGATTGGAGAAGGAGTTGATCTCACTGTGATTGCT
GGAAATCGAAGTGTCATAGACGGCTGGACAACCTATAATTCAGCAACCTTTGCCGTTTCA
GGGGAACGGTTTGTAGCCATAAACATAACATTCAAGAACCTAGCTGGTCCTTGGAAGCAC
CAAGCTGTAGCTCTAAGGAACAATGCGGACCTTTCCACATTCTATAGATGTCGTTTTGAG
GGCTATCAAGATACTTTGTACACGCACTCTTTAAGACAATTCTACAGAGAATGCAATATC
TATGGTACAGTGGACTTCATCTTTGGCAATGCAGCTGCAGTTTTCCAAAACTGCAATCTA
TTTGCTAGGAAACCACTGCCAGACCAGAAGAATATTTTCACAGCACAAGGCCGAAGTGAT
CCCAATCAGAACACTGGCATTTCTATCCAGAACTGCACCATTCAAGCTGCACCTGATTTG
GCTCAGGACATGAATCTCACGTTAAGTTTTCTTGGCCGGCCATGGCACAATTACTCTAGG
ACTGTTATCATGCAGTCTTATATAGGAGATGTGATCGCGCCTGTTGGATGGTTAGAGTGG
AATGGAACGAATGGACTCGACACCCTTTACTATGGGGAGTTTGAGAATTATGGACCAGGG
GCTAATACAACAAAAAGAGTAGAATGGCCTGGTTATTACTTAATGAATGCTTCACAAGCA
ATGAACTTTACTGTCTATAATTTTACAATGGGAGATACTTGGTTGCCGTCTACAAATGTT
CCTTTCTCTCAAGGCCTGTAG

Peptide Sequence

PEP ID

XP_016464978.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 25 [Nicotiana tabacum]
Sequence

MSKQLLLFFFILFSLTLPIFSQITPPSQSPSVACKSSLYPKLCRSLLSAFQHSPSNPNDY
SKFSVKQCQKNAGKLSSLIAHFLTTQKGRALFVNSKEITALNDCHQLSELTVDYLESISA
ELKAADGATTSDALVGKMQTLLSAVVTNQQTCYEGLKEAGSSMVAELLAPLSNAAEIYSV
SLGLVAHALGRVRKPRKTGGLLAEHRGLMEEEYWARDSRLMASKVKQASERSHQRGGRIL
DELVENGVHINQTVTVSPYGGCNFTSIGEAIAFAPNNSMIEDGYFLIYAKQGYYEEYVVV
PKNKKNIMLIGEGVDLTVIAGNRSVIDGWTTYNSATFAVSGERFVAINITFKNLAGPWKH
QAVALRNNADLSTFYRCRFEGYQDTLYTHSLRQFYRECNIYGTVDFIFGNAAAVFQNCNL
FARKPLPDQKNIFTAQGRSDPNQNTGISIQNCTIQAAPDLAQDMNLTLSFLGRPWHNYSR
TVIMQSYIGDVIAPVGWLEWNGTNGLDTLYYGEFENYGPGANTTKRVEWPGYYLMNASQA
MNFTVYNFTMGDTWLPSTNVPFSQGL

Transcript Sequence

Gene sequence data has not been registered.